BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034H07LP1|AL429967
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1555 1785 0.0
>3x_Contig1555
Length = 10828
Score = 1785 bits (899), Expect = 0.0
Identities = 901/903 (99%)
Strand = Plus / Minus
Query: 5 tctcataacaagttatactggaaacaatgtcattttcccaagagatccgtcgtcgtgggt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5639 tctcataacaagttatactggaaacaatgtcattttcccaagagatccgtcgtcgtgggt 5580
Query: 65 cttatgccccaatcgatttcactcctgaggtgtctcaggcttgccgcaaacaagtggaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5579 cttatgccccaatcgatttcactcctgaggtgtctcaggcttgccgcaaacaagtggaat 5520
Query: 125 tctacttcagtgaatataatttgccctacgataaatttttacgctctctatgcgaacaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5519 tctacttcagtgaatataatttgccctacgataaatttttacgctctctatgcgaacaga 5460
Query: 185 atgacggatggattccaattacgacacttgcgtctttcaacagaatgaaaaagtatagac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5459 atgacggatggattccaattacgacacttgcgtctttcaacagaatgaaaaagtatagac 5400
Query: 245 ctgtcgacaaagttgttgattgtttaaaggactcgacgattctagaggttagcgctgatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5399 ctgtcgacaaagttgttgattgtttaaaggactcgacgattctagaggttagcgctgatg 5340
Query: 305 gtgaaaatgtgcgtagaaagagtccattagagacagttgattttaaggacaggaacgaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5339 gtgaaaatgtgcgtagaaagagtccattagagacagttgattttaaggacaggaacgaaa 5280
Query: 365 gagtgttagtgtttatgaactttaagaagatcgaaaatgaagataaagataaattcctag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5279 gagtgttagtgtttatgaactttaagaagatcgaaaatgaagataaagataaattcctag 5220
Query: 425 aattacaagaagaactagagaagttcttcaatgggttcaccactgttaaccaagttcgtt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5219 aattacaagaagaactagagaagttcttcaatgggttcaccactgttaaccaagttcgtt 5160
Query: 485 tgaagaaggaccataagaaatacttcaacggtgttgtcgaagtcgaattcaagacgaagg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5159 tgaagaaggaccataagaaatacttcaacggtgttgtcgaagtcgaattcaagacgaagg 5100
Query: 545 aggaatgtgtcaaattctttgaggaacacaagaccgatttctcatatcagggacaaccat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5099 aggaatgtgtcaaattctttgaggaacacaagaccgatttctcatatcagggacaaccat 5040
Query: 605 tggaagttgtcactaagaagcaatacagcctcgccaagaatgcaactagatcaaagaatt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5039 tggaagttgtcactaagaagcaatacagcctcgccaagaatgcaactagatcaaagaatt 4980
Query: 665 tcggtggttctggtcaaaagacaagatcattaactggttacaggaagaacatcccaaaga 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4979 tcggtggttctggtcaaaagacaagatcattaactggttacaggaagaacatcccaaaga 4920
Query: 725 ctaatgacgaaactcctgaagccagttctgaatcaaagctcagtgaaggagatgccaatg 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4919 ctaatgacgaaactcctgaagccagttctgaatcaaagctcagtgaaggagatgccaatg 4860
Query: 785 ctccaactgagaagaaatcggaagaaagtgccacagaaactgcttaaggcagtscgggct 844
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4859 ctccaactgagaagaaatcggaagaaagtgccacagaaactgcttaaggcagtccgggct 4800
Query: 845 attctcatattgttattctaaagctcttttttccggtgtcaatcgaactctttgccagtr 904
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4799 attctcatattgttattctaaagctcttttttccggtgtcaatcgaactctttgccagta 4740
Query: 905 aat 907
|||
Sbjct: 4739 aat 4737
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6887
Number of Sequences: 1807
Number of extensions: 6887
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)